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In our Biomedical Informatics center we have
server and Desktop computers with printers and scanner.
Specifications of the Equipment
Server: XEON
3.2 GHz dual processor LINUX
based Server and 2 GB memory with 5X72 GB Hard Disk.
Desktop computers:
Intel Pentium D 830
Dual Core Processor 2.8 GHz with 1 MB L2 cache Memory.
Memory (RAM): 1280
MB 400 MHz DDR2 RAM.
Hard Disk Drive:
160 GB Serial ATA HDD (7200 RPM).
Monitor: 43cm (17")
SVGA Digital Color Monitor (Support1024 x 768 NI
Resolutions).
Combo Drive:
16X10X40 CD R/W and 12X DVD
We have one HP Laserjet printer (HP
3800)
We have one HP scanner with auto feeder (HP
8390)
Software Facilities
We have GCG Packages
and Discovery Studio (Life Science and Simulation) of
accelrys
Discovery Studio
(Life Science and Simulation): It has lots of software
Product.
The products are:
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Visualization Software
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Discovery Studio Visulizer Pro
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DS Visulizer
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Protein Modeling Software
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Modeler
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Protein Families
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Protein Similarity Search
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Simulations
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CHARMm
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CHARMm Lite
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CCF Advanced Class II Forcefiled
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Analysis Software
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Biopolymer
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Analysis
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Protein Health
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Receptor-Ligand Intreactions
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LigandFit
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LigandFit/CAP
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LigandScore
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Ludi
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Ludi\CAP
CGC
packages also has lots of sequencing software
The products are:
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Sequence Acquisition
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Sequencing Project
Assembly Using SeqMerge
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Primary Nucleic Acid
Analysis
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Pairwise Comparison:
Compare/DotPlot and Scoring Matrices
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Pairwise Alignment:
Gap, BestFit, and FrameAlign
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Database Similarity
Search: BLAST and Fasta
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Multiple Sequence
Alignment and Phylogeny: ClustalW+ and PAUP
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Pattern Finding:
FindPatterns, Motifs, HMMERPfam, and MEME/MotifSearch
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Profile Hidden Markov
Model: HMMERBuild, HMMERCalibrate, and HMMERSearch
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Nucleic Acid
Secondary Structure Prediction: MFOLD and PlotFold.
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